Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11743291 chr5:1948736 C/T 1.92E-8 503 31.77 26.57 30.4 KM Plot
THCA rs11747471 chr5:1948597 T/C 1.92E-8 503 31.77 26.57 30.4 KM Plot
THCA rs117492604 chr16:79267830 G/A 6.76E-13 478 31.7 31 19.35 KM Plot
THCA rs11758796 chr6:133232586 A/C 2.34E-6 493 31.45 32.9 30.22 KM Plot
THCA rs117628750 chr21:47748501 T/C 8.67E-6 503 31.6 32.27 11.87 KM Plot
THCA rs11763318 chr7:43936216 C/T 1.66E-9 503 31.02 34.02 31.03 KM Plot
THCA rs117639730 chr10:94449733 G/A 0.000133 499 31.47 33.87 18.55 KM Plot
THCA rs117650436 chr8:24945516 C/T 2.42E-6 496 31.4 38 35.22 KM Plot
THCA rs11766571 chr7:43987578 A/G 2.24E-8 503 31.27 33.38 32.37 KM Plot
THCA rs11766887 chr7:44005328 G/T 3.65E-9 495 31.15 33.08 33.7 KM Plot
THCA rs11766894 chr7:44005528 C/T 3.65E-9 495 31.15 33.08 33.7 KM Plot
THCA rs11768707 chr7:43943717 A/C 2.54E-9 503 31.15 33.53 30.83 KM Plot
THCA rs11768969 chr7:43882734 C/T 2.74E-5 493 31.47 32.27 43.77 KM Plot
THCA rs11769201 chr7:43949063 T/G 9.58E-6 500 31.27 33.27 32.37 KM Plot
THCA rs11770228 chr7:43989377 G/A 2.24E-8 503 31.27 33.38 32.37 KM Plot